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Wyszukujesz frazę "Chen, Jessica" wg kryterium: Autor


Tytuł:
Network analysis of neuropsychiatric, cognitive, and functional complications of stroke : implications for novel treatment targets
Autorzy:
Lam, Ben
Sachdev, Perminder S.
Chen, Christopher
Traykov, Latchezar
Oestreich, Lena K.L.
Desmond, David W.
Klimkowicz-Mrowiec, Aleksandra
Wright, Paul
Di Biase, Maria A.
Mok, Alice H.
van Oostenbrugge, Robert
Crawford, John D.
Bordet, Régis
Yu, Kyung‐Ho
O'Sullivan, Michael J.
Lee, Minwoo
Staals, Julie E.A.
Lo, Jessica W.
Köhler, Sebastian
Zalesky, Andrew
Opis:
Aim: Recovery from stroke is adversely affected by neuropsychiatric complications, cognitive impairment, and functional disability. Better knowledge of their mutual relationships is required to inform effective interventions. Network theory enables the conceptualization of symptoms and impairments as dynamic and mutually interacting systems. We aimed to identify interactions of poststroke complications using network analysis in diverse stroke samples. Methods: Data from 2185 patients were sourced from member studies of STROKOG (Stroke and Cognition Consortium), an international collaboration of stroke studies. Networks were generated for each cohort, whereby nodes represented neuropsychiatric symptoms, cognitive deficits, and disabilities on activities of daily living. Edges characterized associations between them. Centrality measures were used to identify hub items. Results: Across cohorts, a single network of interrelated poststroke complications emerged. Networks exhibited dissociable depression, apathy, fatigue, cognitive impairment, and functional disability modules. Worry was the most central symptom across cohorts, irrespective of the depression scale used. Items relating to activities of daily living were also highly central nodes. Follow-up analysis in two studies revealed that individuals who worried had more densely connected networks than those free of worry (CASPER [Cognition and Affect after Stroke: Prospective Evaluation of Risks] study: S = 9.72, P = 0.038; SSS [Sydney Stroke Study]: S = 13.56, P = 0.069). Conclusion: Neuropsychiatric symptoms are highly interconnected with cognitive deficits and functional disabilities resulting from stroke. Given their central position and high level of connectedness, worry and activities of daily living have the potential to drive multimorbidity and mutual reinforcement between domains of poststroke complications. Targeting these factors early after stroke may have benefits that extend to other complications, leading to better stroke outcomes.
Dostawca treści:
Repozytorium Uniwersytetu Jagiellońskiego
Artykuł
Tytuł:
The SEQC2 epigenomics quality control (EpiQC) study : comprehensive characterization of epigenetic methods, reproducibility, and quantification
Autorzy:
Lundmark, Anders
Padmanabhan, Karthik Ramaswamy
Muszyńska, Agata
Deng, Youping
Langhorst, Bradley W.
Cavalcante, Raymond
Gong, Ting
Rosas, Rocio
Scherer, Andreas
Davis, Justin Wade
Ponnaluri, V. K. Chaithanya
Bruinsma, Stephen
Mozsary, Christopher
Suzuki, Masako
Li, Jing
Megherbi, Dalila B.
Łabaj, Paweł
Lalancette, Claudia
Yang, Xiaopeng
Guo, Shang
Liao, Will
Golda, Gosia
Alonso, Alicia
Nasu, Masaki
Sheridan, Caroline
Wos, Frank
Xiao, Wenming
Axelsson, Tomas
Wang, Charles
Yang, Zhaowei
Melnick, Ari
Ibanez de Caceres, Inmaculada
Ishii, Jennifer
Liljedahl, Ulrika
Rodriguez-Antolin, Carlos
Tong, Weida
Franke, Vedran
Campbell, Matthew A.
Hong, Huixiao
Foox, Jonathan
Chen, Zhong
Ning, Baitang
Lacey, Michelle
Butler, Daniel
Lent, Samantha
Raine, Amanda
Nordlund, Jessica
Blume, Alexander
Akalin, Altuna
Mason, Christopher E.
Williams, Louise
Menor, Mark
Wang, Yunliang
Wang, Hongwei
Gurvitch, Justin
Xu, Joshua
Greally, John M.
Opis:
Cytosine modifications in DNA such as 5-methylcytosine (5mC) underlie a broad range of developmental processes, maintain cellular lineage specification, and can define or stratify types of cancer and other diseases. However, the wide variety of approaches available to interrogate these modifications has created a need for harmonized materials, methods, and rigorous benchmarking to improve genome-wide methylome sequencing applications in clinical and basic research. Here, we present a multi-platform assessment and cross-validated resource for epigenetics research from the FDA’s Epigenomics Quality Control Group.
Dostawca treści:
Repozytorium Uniwersytetu Jagiellońskiego
Artykuł
Tytuł:
A View from the past into our collective future : the oncofertility consortium vision statement
Autorzy:
Goldman, Kara
Ataman-Millhouse, Lauren
Bumbuliene, Žana
Rodriguez-Wallberg, Kenny
Wartella, Ellen
Meacham, Lillian
Nahata, Leena
Jayasinghe, Yasmin
Wilcox, Lea
Victorson, David
Appiah, Leslie
Schafer-Kalkhoff, Tara
Fair, Douglas
Chen, Diane
Suzuki, Nao
Salama, Mahmoud
Skiles, Jodi
Bader, Joy
Scarella, Anibal
Sugimoto, Kouhei
Wyns, Christine
Sobral, Fabio
Viale, Luz
Gomez-Lobo, Veronica
Shikanov, Ariella
Kusuhara, Atsuko
Burns, Karen
Rhoton-Vlasak, Alice
El-Damen, Ahmed
de Carvalho, Bruno
Quinn, Gwendolyn
Jeruss, Jacqueline
Ketterl, Tyler
Quintana, Tomas
Xiao, Shuo
Gracia, Clarisa
Chehin, Mauricio
Quintana, Ramiro
Pavone, Mary
Hazelrigg, Brent
Smith, Kristin
Wallace, W.
Whiteside, Stacy
Khrouf, Mohamed
Anderson, Richard
Becktell, Kerri
Keim-Malpass, Jessica
Roeca, Cassandra
Hoyos-Martinez, Alfonso
Rios, Julie
Westphal, Lynn
Hsieh, Michael
Campo-Engelstein, Lisa
Breech, Lesley
Acharya, Kelly
Rotz, Seth
Kimelman, Dana
Almeida-Santos, Teresa
McGinnis, Lynda
Thakur, Mili
Orwig, Kyle
Saraf, Amanda
Smith, James
Lee, Jung
Ramsey-Goldman, Rosalind
Shnorhavorian, Margarett
Mijangos, Monserrat
Rowell, Erin
Senapati, Suneeta
De Vos, Michel
Ginsberg, Jill
Pulaski, Hanna
Peccatori, Fedro
Kutteh, William
Ogweno, George
Pesce, Romina
Campos, Jacira
Fechner, Patricia
Xu, Jing
Anazodo, Antoinette
Jassem, Jacek
Woodruff, Teresa
Jach, Robert
Duncan, Francesca
Fontoura, Paula
Laronda, Monica
Frias, Olivia
Centola, Grace
Letourneau, Joseph
Schmidt, Deb
Jeelani, Roohi
Lehmann, Vicky
Vitek, Wendy
Moravek, Molly
Reinecke, Joyce
Brannigan, Robert
Reis, Fernando
Stimpert, Kyle
McMahon, Eileen
Bourlon, Maria
Gerkowicz, Sabrina
Kaul-Mahajan, Nalini
Famuyiwa, Yemi
Zelinski, Mary
Javed, Murid
Shah, Divya
Dostawca treści:
Repozytorium Uniwersytetu Jagiellońskiego
Artykuł
Tytuł:
Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions
Autorzy:
Ma, Charles
Supplee, Julianna
Zhang, Sa
Kreil, David Philip
Blomquist, Thomas M.
Tom, Nikola
Xiao, Chunlin
Li, Weihua
LoCoco, Jennifer S.
Jones, Wendell
Megherbi, Dalila B.
Hipp, Jennifer
Horvath, Kyle
Strahl, Maya
Marella, Narasimha
Silla-Castro, Juan Carlos
López, Mario Solís
Qu, Wubin
Liang, Yu
Verma, Suman
Eterovic, Agda Karina
Pirooznia, Mehdi
Pabón-Peña, Carlos
Ghosal, Abhisek
Craig, Daniel J.
Chen, Tao
Hennigan, Brittany
Deveson, Ira W.
Qiu, Fujun
Chang, Chia-Jung
del Pozo, Angela
Tang, Lin-ya
Yip, Shun H.
Duncan, Daniel
Hu, Jianhong
Stetson, Daniel
Shi, Tieliu
Li, Quan-Zhen
Shaknovich, Rita
Chin, Christopher R.
Richmond, Todd A.
Willey, James C.
Bhandari, Ambica
Sebra, Robert
Zhang, Guangliang
Burgess, Daniel
Tichý, Boris
Jarosz, Mirna
Liu, Liang-Chun
Fan, Xiaohui
Szankasi, Philippe
Bushel, Pierre R.
Haseley, Nathan
Gong, Binsheng
Scherer, Andreas
Glenn, Sean
Crawford, Erin
Hong, Huixiao
Martín-Arenas, Rubén
Hung, Li-Yuan
Wirta, Valtteri
Chaubey, Alka
Bao, Wenjun
Li, Zhiguang
Shi, Leming
Zhou, Xiaoyan
Kerkhof, Jennifer
Lader, Eric
Garcia, Elena Vallespin
Chierici, Marco
Xu, Shibei
Li, Dan
Xu, Joshua
Liu, Zhichao
Morrison, Tom
Walker, Kimbley
Tan, Haowen
Mason, Christopher E.
Johann, Donald J.
Łabaj, Paweł
Butler, Daniel J.
Wang, Junwen
Best, Hunter
Ning, Baitang
Parsons, Barbara L.
Arib, Hanane
Thierry-Mieg, Danielle
Lapunzina, Pablo
Blackburn, James
Tao, Yonghui
Wang, Charles
Thomas, David
Zhao, Meiru
Happe, Scott
Cai, Wanshi
Zheng, Yuanting
Stuart, Alan
Shi, Qiang
Sadikovic, Bekim
Giorda, Kristina
Boardman, Lisa
Wen, Zhining
Kusko, Rebecca
Xu, Chang
Raymond, Amelia
Chen, Guangchun
Mittal, Vinay K.
Hang, Xinyi
Meng, Qingchang
Zhang, Yifan
Li, Peng
Wang, Yexun
Thakkar, Shraddha
Thodima, Venkat J.
Wilkins, Katherine
Tong, Weida
Mieczkowski, Piotr A.
Lucas, Anne Bergstrom
Cooley Coleman, Jessica
Liu, Shaoqing
Ringler, Rebecca
Lai, Kevin
Schulze, Egbert
Yu, Ying
Mercer, Timothy
Muzny, Donna
Guan, Meijian
Yang, Mary
Rindler, Paul
Song, Ping
Paweletz, Cloud P.
Wu, Leihong
Bao, Longlong
Kipp, Benjamin
Attwooll, Claire
Wang, Shangzi
Haag, Christine
Smith, Melissa
Thierry-Mieg, Jean
Furlanello, Cesare
Bisgin, Halil
Ying, Jianming
Novoradovskaya, Natalia
Zhang, Zhihong
Babson, Kevin
Close, Devin
Conroy, Jeffrey
Burgher, Blake
Xiao, Wenzhong
Cawley, Simon
Foox, Jonathan
Opis:
Targeted sequencing using oncopanels requires comprehensive assessments of accuracy and detection sensitivity to ensure analytical validity. By employing reference materials characterized by the U.S. Food and Drug Administration-led SEquence Quality Control project phase2 (SEQC2) effort, we perform a cross-platform multi-lab evaluation of eight Pan-Cancer panels to assess best practices for oncopanel sequencing.
Dostawca treści:
Repozytorium Uniwersytetu Jagiellońskiego
Artykuł
Tytuł:
Contribution of common genetic variants to risk of early-onset ischemic stroke
Autorzy:
Jimenez-Conde, Jordi
Ryan, Kathleen A.
Luke, Sothear
Gieger, Christian
Pera, Joanna
Thijs, Vincent
Smith, Jennifer A.
Mitchell, Braxton D.
Chong, Michael
Rexrode, Kathryn
Cruchaga, Carlos
Torres-Aguila, Nuria P.
Markus, Hugh S.
Heitsch, Laura
Walters, Robin G.
Li, Jiang
Rosand, Jonathan
Jaworek, Thomas
Kamatani, Yoichiro
Meschia, James F.
Holliday, Elizabeth
Mcardle, Patrick F.
Anderson, Christopher D.
Ilinca, Andreea
Bell, Steven
Cushman, Mary
Gaynor, Brady J.
Muller-Nurasyid, Martina
Putaala, Jukka
Cole, John W.
Engstrom, Gunnar
Grittner, Ulrike
Strbian, Daniel
Kardia, Sharon L.R.
Levi, Christopher R.
Hong, Charles C.
O'Donnell, Martin
Pare, Guillaume
Zand, Ramin
Tuladhar, Anil M.
Faul, Jessica D.
Havulinna, Aki S.
Sacco, Ralph L.
Mcdonough, Caitrin W.
Jern, Christina
Boncoraglio, Giorgio B.
Hu, Jie
Rothwell, Peter M.
Metso, Tiina
Lin, Kuang
Giese, Anne-Katrin
Fecteau, Natalie S.
Jackson, Rebecca D.
Johnson, Julie A.
Ribases, Marta
Attia, John
Veldink, Jan H.
de Leeuw, Frank-Erik
Lemmens, Robin
O'Connor, Timothy D.
Danesh, John
Irvin, Marguerite R.
Perry, James A.
Hochberg, Marc C.
Stine, O. Colin
Fernandez-Cadenas, Israel
Tomppo, Liisa
Abedi, Vida
Grewal, Raji P.
Li, Liming
Sanchez-Mora, Cristina
Lange, Leslie
Ross, Owen A.
Chen, Zhengming
Debette, Stephanie
Wassertheil-Smoller, Sylvia
Stanne, Tara M.
Jacob, Mina A.
Smith, Nicholas L.
Dichgans, Martin
Sudlow, Cathie L.M.
Kittner, Steven J.
Rannikmae, Kristiina
Peddareddygari, Leema R.
Lopez, Haley
Peters, Annette
Benavente, Oscar R.
Weir, David R.
Salomaa, Veikko
Enzinger, Chris
Lindgren, Arne G.
Tatlisumak, Turgut
Durda, Jon Peter
Ray, Debashree
Xu, Huichun
Lee, Jin-Moo
Worrall, Bradford B.
Butterworth, Adam
Słowik, Agnieszka
Soderholm, Martin
Woo, Daniel
Carcel-Marquez, Jara
Duggan, David J.
Maguire, Jane
Koido, Masaru
Sharma, Pankaj
Terao, Chikashi
Malik, Rainer
Schmidt, Reinhold
Amouyel, Philippe
Kubo, Michiaki
Rabionet, Raquel
Tregouet, David-Alexandre
Armstrong, Nicole D.
Rundek, Tatjana
Opis:
Background and Objectives:Current genome-wide association studies of ischemic stroke have focused primarily on late-onset disease. As a complement to these studies, we sought to identify the contribution of common genetic variants to risk of early-onset ischemic stroke: Methods: We performed a meta-analysis of genome-wide association studies of early-onset stroke (EOS), ages 18–59 years, using individual-level data or summary statistics in 16,730 cases and 599,237 nonstroke controls obtained across 48 different studies. We further compared effect sizes at associated loci between EOS and late-onset stroke (LOS) and compared polygenic risk scores (PRS) for venous thromboembolism (VTE) between EOS and LOS. Results: We observed genome-wide significant associations of EOS with 2 variants in ABO, a known stroke locus. These variants tag blood subgroups O1 and A1, and the effect sizes of both variants were significantly larger in EOS compared with LOS. The odds ratio (OR) for rs529565, tagging O1, was 0.88 (95% confidence interval [CI]: 0.85–0.91) in EOS vs 0.96 (95% CI: 0.92–1.00) in LOS, and the OR for rs635634, tagging A1, was 1.16 (1.11–1.21) for EOS vs 1.05 (0.99–1.11) in LOS; p-values for interaction = 0.001 and 0.005, respectively. Using PRSs, we observed that greater genetic risk for VTE, another prothrombotic condition, was more strongly associated with EOS compared with LOS (p = 0.008). Discussion: The ABO locus, genetically predicted blood group A, and higher genetic propensity for venous thrombosis are more strongly associated with EOS than with LOS, supporting a stronger role of prothrombotic factors in EOS.
Dostawca treści:
Repozytorium Uniwersytetu Jagiellońskiego
Artykuł

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