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Wyświetlanie 1-7 z 7
Tytuł:
Fixed-target pump–probe SFX : eliminating the scourge of light contamination
Autorzy:
Gotthard, Guillaume
Kepa, Michal W.
Flores Ibarra, Andrea
Dworkowski, Florian
Bealec, John H.
Nogły, Przemysław
Carrillo, Melissa
Ozerov, Dmitry
Padeste, Celestino
Stegmann, Dennis P.
Pachota, Magdalena
Pedrini, Bill F.
Mason, Thomas J.
Olasz, Bence
Opis:
X-ray free-electron laser (XFEL) light sources have enabled the rapid growth of time-resolved structural experiments, which provide crucial information on the function of macromolecules and their mechanisms. Here, the aim was to commission the SwissMX fixed-target sample-delivery system at the SwissFEL Cristallina experimental station using the PSI-developed micro-structured polymer (MISP) chip for pump–probe time-resolved experiments. To characterize the system, crystals of the light-sensitive protein light–oxygen–voltage domain 1 (LOV1) from Chlamydomonas reinhardtii were used. Using different experimental settings, the accidental illumination, referred to as light contamination, of crystals mounted in wells adjacent to those illuminated by the pump laser was examined. It was crucial to control the light scattering from and through the solid supports otherwise significant contamination occurred. However, the results here show that the opaque MISP chips are suitable for defined pump–probe studies of a light-sensitive protein. The experiment also probed the sub-millisecond structural dynamics of LOV1 and indicated that at $\Delta$t = 10 $\mu$s a covalent thio­ether bond is established between reactive Cys57 and its flavin mononucleotide cofactor. This experiment validates the crystals to be suitable for in-depth follow-up studies of this still poorly understood signal-transduction mechanism. Importantly, the fixed-target delivery system also permitted a tenfold reduction in protein sample consumption compared with the more common high-viscosity extrusion-based delivery system. This development creates the prospect of an increase in XFEL project throughput for the field.
Dostawca treści:
Repozytorium Uniwersytetu Jagiellońskiego
Artykuł
Tytuł:
Structural effects of high laser power densities on an early bacteriorhodopsin photocycle intermediate
Autorzy:
Bertrand, Quentin
Nogły, Przemysław
Nass, Karol
Iwata, So
Schertler, Gebhard
Tanaka, Rie
Standfuss, Jörg
James, Daniel
Brünle, Steffen
Furrer, Antonia
Weinert, Tobias
Kepa, Michal
Kekilli, Demet
Panneels, Valerie
Börjesson, Per
Ortolani, Giorgia
Skopintsev, Petr
Tanaka, Tomoyuki
Huang, Chia-Ying
Mous, Sandra
Neutze, Richard
Tono, Kensuke
Johnson, Philip J. M.
Khusainov, Georgii
Knopp, Gregor
Owada, Shigeki
Martiel, Isabelle
Ozerov, Dmitry
Milne, Christopher
Dworkowski, Florian
Nango, Eriko
Cirelli, Claudio
Opis:
Time-resolved serial crystallography at X-ray Free Electron Lasers offers the opportunity to observe ultrafast photochemical reactions at the atomic level. The technique has yielded exciting molecular insights into various biological processes including light sensing and photochemical energy conversion. However, to achieve sufficient levels of activation within an optically dense crystal, high laser power densities are often used, which has led to an ongoing debate to which extent photodamage may compromise interpretation of the results. Here we compare time-resolved serial crystallographic data of the bacteriorhodopsin K-intermediate collected at laser power densities ranging from 0.04 to 2493 GW/cm2 and follow energy dissipation of the absorbed photons logarithmically from picoseconds to milliseconds. Although the effects of high laser power densities on the overall structure are small, in the upper excitation range we observe significant changes in retinal conformation and increased heating of the functionally critical counterion cluster. We compare light-activation within crystals to that in solution and discuss the impact of the observed changes on bacteriorhodopsin biology.
Dostawca treści:
Repozytorium Uniwersytetu Jagiellońskiego
Artykuł
    Wyświetlanie 1-7 z 7

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